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gdcm-2.8
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10/28/2024 06:50:42 AM
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gdcmAAbortPDU.h
1.43 KB
11/09/2017 08:09:58 AM
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gdcmAAssociateACPDU.h
3.22 KB
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gdcmAAssociateRJPDU.h
1.35 KB
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gdcmAAssociateRQPDU.h
5.41 KB
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gdcmARTIMTimer.h
2.48 KB
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gdcmAReleaseRPPDU.h
1.28 KB
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gdcmAReleaseRQPDU.h
1.28 KB
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gdcmASN1.h
1.22 KB
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gdcmAbstractSyntax.h
1.78 KB
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gdcmAnonymizeEvent.h
1.5 KB
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gdcmAnonymizer.h
6.67 KB
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gdcmApplicationContext.h
1.56 KB
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gdcmApplicationEntity.h
1.81 KB
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gdcmAsynchronousOperationsWindowSub.h
1.37 KB
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gdcmAttribute.h
32.28 KB
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gdcmAudioCodec.h
1011 bytes
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gdcmBase64.h
1.9 KB
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gdcmBaseCompositeMessage.h
2.39 KB
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gdcmBaseNormalizedMessage.h
2.22 KB
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gdcmBasePDU.h
1.96 KB
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gdcmBaseQuery.h
2.74 KB
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gdcmBaseRootQuery.h
4.33 KB
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gdcmBasicOffsetTable.h
3.17 KB
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gdcmBitmap.h
5.7 KB
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gdcmBitmapToBitmapFilter.h
1.22 KB
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gdcmBoxRegion.h
2.02 KB
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gdcmByteBuffer.h
2.45 KB
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gdcmByteSwap.h
1.46 KB
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gdcmByteSwap.txx
4.55 KB
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gdcmByteSwapFilter.h
1.1 KB
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gdcmByteValue.h
6.53 KB
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gdcmCAPICryptoFactory.h
931 bytes
11/09/2017 08:09:58 AM
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gdcmCAPICryptographicMessageSyntax.h
1.96 KB
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gdcmCEchoMessages.h
1.46 KB
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gdcmCFindMessages.h
1.65 KB
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gdcmCMoveMessages.h
1.88 KB
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gdcmCP246ExplicitDataElement.h
1.59 KB
11/09/2017 08:09:58 AM
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gdcmCP246ExplicitDataElement.txx
6.51 KB
11/09/2017 08:09:58 AM
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gdcmCSAElement.h
4.76 KB
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gdcmCSAHeader.h
4.89 KB
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gdcmCSAHeader.txx
957 bytes
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gdcmCSAHeaderDict.h
2.84 KB
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gdcmCSAHeaderDictEntry.h
2.74 KB
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gdcmCStoreMessages.h
1.8 KB
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gdcmCodeString.h
3.67 KB
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gdcmCodec.h
809 bytes
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gdcmCoder.h
1.28 KB
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gdcmCommand.h
5.09 KB
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gdcmCommandDataSet.h
1.7 KB
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gdcmCompositeMessageFactory.h
2.44 KB
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gdcmCompositeNetworkFunctions.h
5.84 KB
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gdcmConfigure.h
5.53 KB
02/05/2018 04:49:23 PM
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gdcmConstCharWrapper.h
1.6 KB
11/09/2017 08:09:58 AM
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gdcmCryptoFactory.h
1.85 KB
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gdcmCryptographicMessageSyntax.h
1.78 KB
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gdcmCurve.h
2.54 KB
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gdcmDICOMDIR.h
984 bytes
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gdcmDICOMDIRGenerator.h
3.85 KB
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gdcmDIMSE.h
2.61 KB
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gdcmDataElement.h
9 KB
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gdcmDataEvent.h
1.53 KB
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gdcmDataSet.h
10.79 KB
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gdcmDataSet.txx
16.02 KB
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gdcmDataSetEvent.h
1.47 KB
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gdcmDataSetHelper.h
1.22 KB
11/09/2017 08:09:58 AM
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gdcmDecoder.h
1.16 KB
11/09/2017 08:09:58 AM
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gdcmDefinedTerms.h
1.56 KB
11/09/2017 08:09:58 AM
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gdcmDeflateStream.h
678 bytes
11/09/2017 08:09:58 AM
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gdcmDefs.h
2.04 KB
11/09/2017 08:09:58 AM
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gdcmDeltaEncodingCodec.h
1.08 KB
11/09/2017 08:09:58 AM
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gdcmDict.h
9.53 KB
11/09/2017 08:09:58 AM
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gdcmDictConverter.h
2.05 KB
11/09/2017 08:09:58 AM
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gdcmDictEntry.h
4.29 KB
11/09/2017 08:09:58 AM
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gdcmDictPrinter.h
1.04 KB
11/09/2017 08:09:58 AM
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gdcmDicts.h
2.22 KB
11/09/2017 08:09:58 AM
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gdcmDirectionCosines.h
1.94 KB
11/09/2017 08:09:58 AM
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gdcmDirectory.h
3.08 KB
11/09/2017 08:09:58 AM
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gdcmDirectoryHelper.h
3.51 KB
11/09/2017 08:09:58 AM
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gdcmDummyValueGenerator.h
1.15 KB
11/09/2017 08:09:58 AM
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gdcmDumper.h
1023 bytes
11/09/2017 08:09:58 AM
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gdcmElement.h
23.5 KB
11/09/2017 08:09:58 AM
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gdcmEmptyMaskGenerator.h
2.64 KB
11/09/2017 08:09:58 AM
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gdcmEncapsulatedDocument.h
866 bytes
11/09/2017 08:09:58 AM
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gdcmEnumeratedValues.h
1.53 KB
11/09/2017 08:09:58 AM
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gdcmEvent.h
3.07 KB
11/09/2017 08:09:58 AM
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gdcmException.h
3.24 KB
11/09/2017 08:09:58 AM
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gdcmExplicitDataElement.h
1.36 KB
11/09/2017 08:09:58 AM
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gdcmExplicitDataElement.txx
16.27 KB
11/09/2017 08:09:58 AM
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gdcmExplicitImplicitDataElement.h
1.81 KB
11/09/2017 08:09:58 AM
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gdcmExplicitImplicitDataElement.txx
14.69 KB
11/09/2017 08:09:58 AM
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gdcmFiducials.h
800 bytes
11/09/2017 08:09:58 AM
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gdcmFile.h
2.1 KB
11/09/2017 08:09:58 AM
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gdcmFileAnonymizer.h
2.84 KB
11/09/2017 08:09:58 AM
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gdcmFileChangeTransferSyntax.h
2.2 KB
11/09/2017 08:09:58 AM
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gdcmFileDecompressLookupTable.h
1.49 KB
11/09/2017 08:09:58 AM
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gdcmFileDerivation.h
3.19 KB
11/09/2017 08:09:58 AM
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gdcmFileExplicitFilter.h
2.43 KB
11/09/2017 08:09:58 AM
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gdcmFileMetaInformation.h
4.78 KB
11/09/2017 08:09:58 AM
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gdcmFileNameEvent.h
1.51 KB
11/09/2017 08:09:58 AM
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gdcmFileSet.h
1.62 KB
11/09/2017 08:09:58 AM
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gdcmFileStreamer.h
4.04 KB
11/09/2017 08:09:58 AM
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gdcmFilename.h
2.26 KB
11/09/2017 08:09:58 AM
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gdcmFilenameGenerator.h
2.09 KB
11/09/2017 08:09:58 AM
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gdcmFindPatientRootQuery.h
1.2 KB
11/09/2017 08:09:58 AM
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gdcmFindStudyRootQuery.h
1.41 KB
11/09/2017 08:09:58 AM
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gdcmFragment.h
6.13 KB
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gdcmFragment.txx
711 bytes
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gdcmGlobal.h
3.41 KB
11/09/2017 08:09:58 AM
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gdcmGroupDict.h
2.29 KB
11/09/2017 08:09:58 AM
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gdcmIOD.h
1.85 KB
11/09/2017 08:09:58 AM
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gdcmIODEntry.h
2.97 KB
11/09/2017 08:09:58 AM
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gdcmIODs.h
2.02 KB
11/09/2017 08:09:58 AM
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gdcmIPPSorter.h
4.62 KB
11/09/2017 08:09:58 AM
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gdcmIconImage.h
2.47 KB
11/09/2017 08:09:58 AM
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gdcmIconImageFilter.h
2.37 KB
11/09/2017 08:09:58 AM
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gdcmIconImageGenerator.h
3.09 KB
11/09/2017 08:09:58 AM
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gdcmImage.h
3.63 KB
11/09/2017 08:09:58 AM
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gdcmImageApplyLookupTable.h
1.11 KB
11/09/2017 08:09:58 AM
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gdcmImageChangePhotometricInterpretation.h
3.77 KB
11/09/2017 08:09:58 AM
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gdcmImageChangePlanarConfiguration.h
2.72 KB
11/09/2017 08:09:58 AM
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gdcmImageChangeTransferSyntax.h
3.29 KB
11/09/2017 08:09:58 AM
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gdcmImageCodec.h
4.51 KB
11/09/2017 08:09:58 AM
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gdcmImageConverter.h
1.27 KB
11/09/2017 08:09:58 AM
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gdcmImageFragmentSplitter.h
1.53 KB
11/09/2017 08:09:58 AM
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gdcmImageHelper.h
6.92 KB
11/09/2017 08:09:58 AM
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gdcmImageReader.h
1.55 KB
11/09/2017 08:09:58 AM
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gdcmImageRegionReader.h
2.44 KB
11/09/2017 08:09:58 AM
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gdcmImageToImageFilter.h
1.15 KB
11/09/2017 08:09:58 AM
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gdcmImageWriter.h
1.46 KB
11/09/2017 08:09:58 AM
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gdcmImplementationClassUIDSub.h
1.27 KB
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gdcmImplementationUIDSub.h
1.14 KB
11/09/2017 08:09:58 AM
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gdcmImplementationVersionNameSub.h
1.28 KB
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gdcmImplicitDataElement.h
1.49 KB
11/09/2017 08:09:58 AM
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gdcmImplicitDataElement.txx
18.5 KB
11/09/2017 08:09:58 AM
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gdcmItem.h
9.65 KB
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gdcmItem.txx
1.82 KB
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gdcmJPEG12Codec.h
1.26 KB
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gdcmJPEG16Codec.h
1.25 KB
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gdcmJPEG2000Codec.h
2.73 KB
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gdcmJPEG8Codec.h
1.25 KB
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gdcmJPEGCodec.h
3.23 KB
11/09/2017 08:09:58 AM
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gdcmJPEGLSCodec.h
2.99 KB
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gdcmJSON.h
1.12 KB
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gdcmKAKADUCodec.h
1.06 KB
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gdcmLO.h
1.81 KB
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gdcmLegacyMacro.h
2.72 KB
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gdcmLookupTable.h
3.33 KB
11/09/2017 08:09:58 AM
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gdcmMD5.h
1.41 KB
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gdcmMacro.h
2.93 KB
11/09/2017 08:09:58 AM
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gdcmMacroEntry.h
2.57 KB
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gdcmMacros.h
2.05 KB
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gdcmMaximumLengthSub.h
1.39 KB
11/09/2017 08:09:58 AM
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gdcmMediaStorage.h
7.39 KB
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gdcmMeshPrimitive.h
2.34 KB
11/09/2017 08:09:58 AM
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gdcmModalityPerformedProcedureStepCreateQuery.h
1.3 KB
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gdcmModalityPerformedProcedureStepSetQuery.h
1.28 KB
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gdcmModule.h
3.15 KB
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gdcmModuleEntry.h
2.51 KB
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gdcmModules.h
2.06 KB
11/09/2017 08:09:58 AM
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gdcmMovePatientRootQuery.h
1.21 KB
11/09/2017 08:09:58 AM
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gdcmMoveStudyRootQuery.h
1.19 KB
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gdcmMrProtocol.h
2.17 KB
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gdcmNActionMessages.h
1.27 KB
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gdcmNCreateMessages.h
1.27 KB
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gdcmNDeleteMessages.h
1.27 KB
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gdcmNEventReportMessages.h
1.31 KB
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gdcmNGetMessages.h
1.24 KB
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gdcmNSetMessages.h
1.24 KB
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gdcmNestedModuleEntries.h
1.88 KB
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gdcmNetworkEvents.h
1.95 KB
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gdcmNetworkStateID.h
2.69 KB
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gdcmNormalizedMessageFactory.h
1.64 KB
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gdcmNormalizedNetworkFunctions.h
3.03 KB
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gdcmObject.h
2.98 KB
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gdcmOpenSSLCryptoFactory.h
1.18 KB
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gdcmOpenSSLCryptographicMessageSyntax.h
2.09 KB
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gdcmOpenSSLP7CryptoFactory.h
1.12 KB
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gdcmOpenSSLP7CryptographicMessageSyntax.h
2.37 KB
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gdcmOrientation.h
1.77 KB
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gdcmOverlay.h
3.71 KB
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gdcmPDBElement.h
1.69 KB
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gdcmPDBHeader.h
2.92 KB
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gdcmPDFCodec.h
1003 bytes
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gdcmPDUFactory.h
3.42 KB
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gdcmPDataTFPDU.h
1.89 KB
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gdcmPGXCodec.h
1.21 KB
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gdcmPNMCodec.h
1.52 KB
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gdcmPVRGCodec.h
1.42 KB
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gdcmParseException.h
2.2 KB
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gdcmParser.h
3.98 KB
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gdcmPatient.h
899 bytes
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gdcmPersonName.h
2.45 KB
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gdcmPhotometricInterpretation.h
2.75 KB
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gdcmPixelFormat.h
7.44 KB
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gdcmPixmap.h
2.29 KB
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gdcmPixmapReader.h
2.05 KB
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Editing: gdcmSequenceOfItems.h
Close
/*========================================================================= Program: GDCM (Grassroots DICOM). A DICOM library Copyright (c) 2006-2011 Mathieu Malaterre All rights reserved. See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notice for more information. =========================================================================*/ #ifndef GDCMSEQUENCEOFITEMS_H #define GDCMSEQUENCEOFITEMS_H #include "gdcmValue.h" #include "gdcmItem.h" #include <vector> #include <cstring> // strcmp namespace gdcm_ns { /** * \brief Class to represent a Sequence Of Items * \details (value representation : SQ) * - a Value Representation for Data Elements that contains a sequence of Data Sets. * - Sequence of Item allows for Nested Data Sets * * See PS 3.5, 7.4.6 Data Element Type Within a Sequence * \note * SEQUENCE OF ITEMS (VALUE REPRESENTATION SQ) * A Value Representation for Data Elements that contain a sequence of * Data Sets. Sequence of Items allows for Nested Data Sets. */ class GDCM_EXPORT SequenceOfItems : public Value { public: // Typdefs: typedef std::vector< Item > ItemVector; typedef ItemVector::size_type SizeType; typedef ItemVector::iterator Iterator; typedef ItemVector::const_iterator ConstIterator; Iterator Begin() { return Items.begin(); } Iterator End() { return Items.end(); } ConstIterator Begin() const { return Items.begin(); } ConstIterator End() const { return Items.end(); } /// \brief constructor (UndefinedLength by default) SequenceOfItems():SequenceLengthField(0xFFFFFFFF) { } //SequenceOfItems(VL const &vl = 0xFFFFFFFF):SequenceLengthField(vl),NType(type) { } /// \brief Returns the SQ length, as read from disk VL GetLength() const { return SequenceLengthField; } /// \brief Sets the actual SQ length void SetLength(VL length) { SequenceLengthField = length; } /// \brief Properly set the Sequence of Item to be undefined length void SetLengthToUndefined(); /// return if Value Length if of undefined length bool IsUndefinedLength() const { return SequenceLengthField.IsUndefined(); } template <typename TDE> VL ComputeLength() const; /// remove all items within the sequence void Clear(); /// \brief Appends an Item to the already added ones void AddItem(Item const &item); /// \brief Appends an Item to the already added ones Item & AddNewUndefinedLengthItem(); /// Remove an Item as specified by its index, if index > size, false is returned /// Index starts at 1 not 0 bool RemoveItemByIndex( const SizeType index ); bool IsEmpty() const { return Items.empty(); }; SizeType GetNumberOfItems() const { return Items.size(); } void SetNumberOfItems(SizeType n) { Items.resize(n); } /* WARNING: first item is #1 (see DICOM standard) * Each Item shall be implicitly assigned an ordinal position starting with the value 1 for the * first Item in the Sequence, and incremented by 1 with each subsequent Item. The last Item in the * Sequence shall have an ordinal position equal to the number of Items in the Sequence. */ const Item &GetItem(SizeType position) const; Item &GetItem(SizeType position); SequenceOfItems &operator=(const SequenceOfItems &val) { SequenceLengthField = val.SequenceLengthField; Items = val.Items; return *this; } template <typename TDE, typename TSwap> std::istream &Read(std::istream &is, bool readvalues = true) { (void)readvalues; const Tag seqDelItem(0xfffe,0xe0dd); if( SequenceLengthField.IsUndefined() ) { Item item; while( item.Read<TDE,TSwap>(is) && item.GetTag() != seqDelItem ) { //gdcmDebugMacro( "Item: " << item ); assert( item.GetTag() != seqDelItem ); Items.push_back( item ); item.Clear(); } //assert( item.GetTag() == seqDelItem && item.GetVL() == 0 ); } else { Item item; VL l = 0; //is.seekg( SequenceLengthField, std::ios::cur ); return is; while( l != SequenceLengthField ) { try { item.Read<TDE,TSwap>(is); } catch( Exception &ex ) { if( strcmp( ex.GetDescription(), "Changed Length" ) == 0 ) { VL newlength = l + item.template GetLength<TDE>(); if( newlength > SequenceLengthField ) { // BogugsItemAndSequenceLength.dcm gdcmWarningMacro( "SQ length is wrong" ); SequenceLengthField = newlength; } } else { throw ex; } } #ifdef GDCM_SUPPORT_BROKEN_IMPLEMENTATION if( item.GetTag() == seqDelItem ) { gdcmWarningMacro( "SegDelItem found in defined length Sequence. Skipping" ); assert( item.GetVL() == 0 ); assert( item.GetNestedDataSet().Size() == 0 ); // we need to pay attention that the length of the Sequence of Items will be wrong // this way. Indeed by not adding this item we are changing the size of this sqi } else // Not a seq del item marker #endif { // By design we never load them. If we were to load those attribute // as normal item it would become very complex to convert a sequence // from defined length to undefined length with the risk to write two // seq del marker Items.push_back( item ); } l += item.template GetLength<TDE>(); if( l > SequenceLengthField ) { gdcmDebugMacro( "Found: Length of Item larger than expected" ) throw "Length of Item larger than expected"; } assert( l <= SequenceLengthField ); //std::cerr << "sqi debug len: " << is.tellg() << " " << l << " " << SequenceLengthField << std::endl; #ifdef GDCM_SUPPORT_BROKEN_IMPLEMENTATION // MR_Philips_Intera_No_PrivateSequenceImplicitVR.dcm // (0x2005, 0x1080): for some reason computation of length fails... if( SequenceLengthField == 778 && l == 774 ) { gdcmWarningMacro( "PMS: Super bad hack" ); SequenceLengthField = l; throw Exception( "Wrong Length" ); //l = SequenceLengthField; } // Bug_Philips_ItemTag_3F3F // (0x2005, 0x1080): Because we do not handle fully the bug at the item // level we need to check here too else if ( SequenceLengthField == 444 && l == 3*71 ) { // This one is a double bug. Item length is wrong and impact SQ length gdcmWarningMacro( "PMS: Super bad hack" ); l = SequenceLengthField; } #endif } assert( l == SequenceLengthField ); } return is; } template <typename TDE,typename TSwap> std::ostream const &Write(std::ostream &os) const { typename ItemVector::const_iterator it = Items.begin(); for(;it != Items.end(); ++it) { it->Write<TDE,TSwap>(os); } if( SequenceLengthField.IsUndefined() ) { // seq del item is not stored, write it ! const Tag seqDelItem(0xfffe,0xe0dd); seqDelItem.Write<TSwap>(os); VL zero = 0; zero.Write<TSwap>(os); } return os; } //protected: void Print(std::ostream &os) const { os << "\t(" << SequenceLengthField << ")\n"; ItemVector::const_iterator it = Items.begin(); for(;it != Items.end(); ++it) { os << " " << *it; } if( SequenceLengthField.IsUndefined() ) { const Tag seqDelItem(0xfffe,0xe0dd); VL zero = 0; os << seqDelItem; os << "\t" << zero; } } static SmartPointer<SequenceOfItems> New() { return new SequenceOfItems; } bool FindDataElement(const Tag &t) const; bool operator==(const Value &val) const { const SequenceOfItems &sqi = dynamic_cast<const SequenceOfItems&>(val); return SequenceLengthField == sqi.SequenceLengthField && Items == sqi.Items; } private: public: /// \brief Total length of the Sequence (or 0xffffffff) if undefined VL SequenceLengthField; /// \brief Vector of Sequence Items ItemVector Items; }; } // end namespace gdcm_ns #include "gdcmSequenceOfItems.txx" #endif //GDCMSEQUENCEOFITEMS_H